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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gh_D12G1679 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 459aa MW: 50395.6 Da PI: 6.7582 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.2 | 4.8e-10 | 173 | 211 | 5 | 43 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 k rr+++NReAAr+sR+RKka++++Le L++ + Gh_D12G1679 173 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLRLTELEQ 211 788*************************86666555554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-7 | 165 | 216 | No hit | No description |
SMART | SM00338 | 5.1E-10 | 169 | 240 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 3.6E-7 | 171 | 215 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.438 | 171 | 215 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.84E-7 | 173 | 216 | No hit | No description |
CDD | cd14708 | 4.74E-24 | 173 | 225 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 176 | 191 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 8.1E-30 | 258 | 331 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009909 | Biological Process | regulation of flower development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 459 aa Download sequence Send to blast |
MQSFKAAATT NPDMFCHSSF FLRGDDCNSR NQTRFPDLGE LDHPAAAFHH DDAFDLSPSS 60 IFSLKSNNVG VVANTLHYGA LNTSIGATAI VSSGTGCLDT GQFMYQKGAT FGASLGNGHI 120 ENWADSGLAD NSQQTDTSTD VDTDHKNQLH GVQLGAVMLD SVDQSKSKSG DQKTLRRLAQ 180 NREAARKSRL RKKAYVQQLE SSRLRLTELE QELQRARQQG IFIASGLSGD HGHTVAGNAA 240 LAFDMEYGRW LDEHQRLIND LRSAVNSHMG DNELCILVGG VMAHYDEVFR LKSIGAKADV 300 FHMLSGMWKT PAERCFMWLG GFRSSELLKI LGNHLEPLTD QQLMGICNLQ QSSQQAEDAL 360 SQGMEALQQS LVDTLSSASL GPSASGNVAD YMGQMAIAMG KLATLENFLH QADLLRQQTL 420 QQMHRILTTR QAARALLVFS DYTSRLRALS SLWLARPRN |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ghi.25255 | 0.0 | boll| ovule |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012438631.1 | 0.0 | PREDICTED: transcription factor HBP-1b(c38)-like | ||||
Swissprot | Q9SX27 | 0.0 | PAN_ARATH; Transcription factor PERIANTHIA | ||||
TrEMBL | A0A0D2T8B5 | 0.0 | A0A0D2T8B5_G | ||||
STRING | POPTR_0008s11710.1 | 0.0 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM667 | 28 | 133 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68640.1 | 1e-145 | bZIP family protein |